Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee export apparatus protein escr | D4M06_RS08250 | Not Available | Positive | 1784117 - 1784770 | 24384.0 |
| type iii secretion system lee export apparatus protein escs | D4M06_RS08255 | Not Available | Positive | 1784770 - 1785039 | 9921.56 |
| type iii secretion system lee export apparatus protein esct | D4M06_RS08260 | Not Available | Positive | 1785039 - 1785815 | 28718.9 |
| type iii secretion system lee export apparatus switch protein escu | D4M06_RS08265 | Not Available | Positive | 1785808 - 1786845 | 39193.5 |
| type iii secretion system lee muramidase etga | D4M06_RS08270 | Not Available | Negative | 1786842 - 1787300 | 17078.5 |
| type iii secretion system lee grla-binding negative regulator grlr | D4M06_RS08275 | Not Available | Positive | 1787496 - 1787867 | 13929.9 |
| type iii secretion system lee transcriptional regulator grla | D4M06_RS08280 | Not Available | Positive | 1787922 - 1788335 | 16085.4 |
| type iii secretion system lee chaperone cesd | D4M06_RS08285 | Not Available | Negative | 1788719 - 1789174 | 17503.7 |
| type iii secretion system lee outer membrane ring protein escc | D4M06_RS08290 | Not Available | Negative | 1789188 - 1790726 | 56201.9 |
| type iii secretion system lee switch protein sepd | D4M06_RS08295 | Not Available | Negative | 1790726 - 1791181 | 17562.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




