Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator uhpa | D4M06_RS08140 | Not Available | Positive | 1764244 - 1764834 | 20890.6 |
| signal transduction histidine-protein kinase/phosphatase uhpb | D4M06_RS08145 | Not Available | Positive | 1764834 - 1766336 | 56262.3 |
| mfs transporter family glucose-6-phosphate receptor uhpc | D4M06_RS08150 | Not Available | Positive | 1766346 - 1767665 | 48217.3 |
| hexose-6-phosphate:phosphate antiporter | D4M06_RS08155 | Not Available | Positive | 1767803 - 1769194 | 50609.6 |
| adenine deaminase | D4M06_RS08160 | Not Available | Negative | 1769240 - 1771006 | 63695.1 |
| duf1198 domain-containing protein | D4M06_RS08170 | Not Available | Positive | 1772567 - 1773019 | 17220.1 |
| dna-binding transcriptional regulator | D4M06_RS08175 | Not Available | Negative | 1773135 - 1773458 | 11638.2 |
| type ii toxin-antitoxin system rele/pare family toxin | D4M06_RS08180 | Not Available | Negative | 1773442 - 1773795 | 13498.2 |
| purine ribonucleoside efflux pump nepi | D4M06_RS08185 | Not Available | Positive | 1774029 - 1775219 | 41853.5 |
| hypothetical protein | D4M06_RS08190 | Not Available | Negative | 1775260 - 1775553 | 11061.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




