Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock chaperone ibpb | D4M06_RS08040 | Not Available | Positive | 1744221 - 1744649 | 16094.1 |
| putative transporter | D4M06_RS08045 | Not Available | Positive | 1744845 - 1746506 | 58942.9 |
| gntr family transcriptional regulator | D4M06_RS08050 | Not Available | Negative | 1746503 - 1747219 | 27315.5 |
| pts sugar transporter subunit iib | D4M06_RS08055 | Not Available | Positive | 1747515 - 1749131 | 58349.2 |
| 6-phospho-alpha-glucosidase | D4M06_RS08060 | Not Available | Positive | 1749131 - 1750453 | 49388.0 |
| arac family transcriptional regulator | D4M06_RS08065 | Not Available | Negative | 1750450 - 1751343 | 33987.9 |
| solute:sodium symporter family transporter | D4M06_RS08070 | Not Available | Positive | 1751510 - 1753225 | 62118.8 |
| sulfatase-like hydrolase/transferase | D4M06_RS08075 | Not Available | Positive | 1753222 - 1754715 | 57260.3 |
| hypothetical protein | D4M06_RS08080 | Not Available | Negative | 1754762 - 1755211 | 15767.9 |
| yidh family protein | D4M06_RS08085 | Not Available | Positive | 1755320 - 1755667 | 12780.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




