Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit beta | D4M06_RS07990 | Not Available | Positive | 1733548 - 1734648 | 40589.1 |
| dna replication/repair protein recf | D4M06_RS07995 | Not Available | Positive | 1734648 - 1735721 | 40516.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | D4M06_RS08000 | Not Available | Positive | 1735750 - 1738164 | 89955.0 |
| yidb family protein | D4M06_RS08005 | Not Available | Positive | 1738395 - 1738802 | 14171.1 |
| sugar-phosphatase | D4M06_RS08010 | Not Available | Positive | 1738917 - 1739729 | 29749.8 |
| hypothetical protein | D4M06_RS08015 | Not Available | Negative | 1739775 - 1740431 | 24200.0 |
| colicin m resistance protein | D4M06_RS08020 | Not Available | Negative | 1740677 - 1741741 | 40126.5 |
| duf3748 domain-containing protein | D4M06_RS08025 | Not Available | Positive | 1741809 - 1743056 | 46201.2 |
| ycek/yidq family lipoprotein | D4M06_RS08030 | Not Available | Negative | 1743058 - 1743390 | 11796.3 |
| heat shock chaperone ibpa | D4M06_RS08035 | Not Available | Positive | 1743696 - 1744109 | 15774.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




