Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low affinity tryptophan permease tnab | D4M06_RS07935 | Not Available | Negative | 1721910 - 1723157 | 45198.3 |
| tryptophanase | D4M06_RS07940 | Not Available | Negative | 1723248 - 1724663 | 52792.4 |
| tryptophanase leader peptide | D4M06_RS07945 | Not Available | Negative | 1724884 - 1724958 | 2894.56 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | D4M06_RS07955 | Not Available | Negative | 1727677 - 1729041 | 49205.8 |
| membrane protein insertase yidc | D4M06_RS07960 | Not Available | Negative | 1729147 - 1730793 | 61543.5 |
| membrane protein insertion efficiency factor yidd | D4M06_RS07965 | Not Available | Negative | 1730796 - 1731053 | 9380.63 |
| ribonuclease p protein component | D4M06_RS07970 | Not Available | Negative | 1731017 - 1731376 | 13789.1 |
| 50s ribosomal protein l34 | D4M06_RS07975 | Not Available | Negative | 1731393 - 1731533 | 5380.74 |
| hypothetical protein | D4M06_RS07980 | Not Available | Negative | 1731763 - 1731843 | 3111.7 |
| chromosomal replication initiator protein dnaa | D4M06_RS07985 | Not Available | Positive | 1732140 - 1733543 | 52543.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




