Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nicotinamidase/pyrazinamidase | D4M06_RS07685 | Not Available | Positive | 1665037 - 1665678 | 23340.2 |
| mfs transporter | D4M06_RS07690 | Not Available | Negative | 1665771 - 1667021 | 46097.8 |
| fadr family transcriptional regulator | D4M06_RS07695 | Not Available | Positive | 1667361 - 1668053 | 26077.5 |
| dha2 family efflux mfs transporter permease subunit | D4M06_RS07700 | Not Available | Positive | 1668076 - 1669503 | 51459.9 |
| ribose operon transcriptional repressor rbsr | D4M06_RS07705 | Not Available | Negative | 1669469 - 1670461 | 36614.1 |
| ribokinase | D4M06_RS07710 | Not Available | Negative | 1670465 - 1671394 | 32292.4 |
| ribose abc transporter substrate-binding protein rbsb | D4M06_RS07715 | Not Available | Negative | 1671520 - 1672410 | 30940.2 |
| ribose abc transporter permease | D4M06_RS07720 | Not Available | Negative | 1672435 - 1673400 | 33454.0 |
| ribose abc transporter atp-binding protein rbsa | D4M06_RS07725 | Not Available | Negative | 1673405 - 1674910 | 55018.9 |
| d-ribose pyranase | D4M06_RS07730 | Not Available | Negative | 1674918 - 1675337 | 15293.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




