Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Rz1 lytic protein | D4M06_RS16805 | Not Available | Positive | 3586148 - 3586366 | 7893.61 |
| C4-type zinc finger protein | D4M06_RS16810 | Not Available | Positive | 3586377 - 3586604 | 8333.07 |
| Hypothetical protein | D4M06_RS16815 | Not Available | Positive | 3586585 - 3586896 | 11642.2 |
| Hypothetical protein | D4M06_RS16820 | Not Available | Positive | 3586889 - 3587179 | 10707.8 |
| Hypothetical protein | D4M06_RS16825 | Not Available | Positive | 3587182 - 3587763 | 21895.6 |
| Putative portal protein | D4M06_RS16830 | Not Available | Positive | 3587763 - 3589427 | 62854.5 |
| Portal protein | D4M06_RS16835 | Not Available | Positive | 3589427 - 3591016 | 58341.6 |
| Virion morphogenesis late f orf | D4M06_RS16840 | Not Available | Positive | 3591000 - 3592331 | 49552.2 |
| Putative virion morphogenesis protein | D4M06_RS16850 | Not Available | Positive | 3592453 - 3592926 | 17605.9 |
| Putative protease protein | D4M06_RS16855 | Not Available | Positive | 3593103 - 3594227 | 40278.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




