Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine--trna ligase | D4M06_RS07435 | Not Available | Negative | 1613201 - 1615129 | 74032.5 |
| shet2/espl2 family type iii secretion system effector toxin | D4M06_RS07440 | Not Available | Positive | 1615652 - 1617550 | 70795.9 |
| hypothetical protein | D4M06_RS07445 | Not Available | Positive | 1617725 - 1617832 | 4115.44 |
| ydiy family protein | D4M06_RS07450 | Not Available | Negative | 1617885 - 1618643 | 27599.6 |
| 6-phosphofructokinase ii | D4M06_RS07455 | Not Available | Positive | 1618930 - 1619859 | 32457.9 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | D4M06_RS07460 | Not Available | Positive | 1619960 - 1620250 | 10865.6 |
| fructosamine kinase family protein | D4M06_RS07465 | Not Available | Positive | 1620356 - 1621216 | 32476.3 |
| hypothetical protein | D4M06_RS07470 | Not Available | Negative | 1621257 - 1621793 | 20416.4 |
| hexitol phosphatase hxpb | D4M06_RS07475 | Not Available | Positive | 1621940 - 1622608 | 24330.7 |
| metal-dependent hydrolase | D4M06_RS07480 | Not Available | Positive | 1622771 - 1623361 | 22381.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




