Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydil family protein | D4M06_RS07285 | Not Available | Positive | 1583173 - 1583529 | 13876.5 |
| mfs transporter | D4M06_RS07290 | Not Available | Positive | 1583629 - 1584843 | 44628.7 |
| mfs transporter | D4M06_RS07295 | Not Available | Positive | 1585070 - 1586335 | 46036.9 |
| quinate/shikimate dehydrogenase | D4M06_RS07300 | Not Available | Positive | 1586347 - 1587213 | 31227.7 |
| type i 3-dehydroquinate dehydratase | D4M06_RS07305 | Not Available | Positive | 1587244 - 1588002 | 27491.3 |
| acetate coa-transferase ydif | D4M06_RS07310 | Not Available | Positive | 1588147 - 1589742 | 57507.6 |
| acyl-coa dehydrogenase | D4M06_RS07315 | Not Available | Positive | 1589756 - 1590907 | 43004.6 |
| arac family transcriptional regulator | D4M06_RS07320 | Not Available | Negative | 1590950 - 1591861 | 34877.2 |
| electron transfer flavoprotein | D4M06_RS07325 | Not Available | Positive | 1592177 - 1592941 | 27404.0 |
| electron transfer flavoprotein subunit alpha | D4M06_RS07330 | Not Available | Positive | 1592961 - 1593899 | 33819.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




