Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfuration protein sufe | D4M06_RS07230 | Not Available | Negative | 1571431 - 1571847 | 15787.2 |
| cysteine desulfurase sufs | D4M06_RS07235 | Not Available | Negative | 1571860 - 1573080 | 44439.3 |
| fe-s cluster assembly protein sufd | D4M06_RS07240 | Not Available | Negative | 1573077 - 1574348 | 46847.5 |
| fe-s cluster assembly atpase sufc | D4M06_RS07245 | Not Available | Negative | 1574323 - 1575069 | 27603.0 |
| fe-s cluster assembly protein sufb | D4M06_RS07250 | Not Available | Negative | 1575079 - 1576566 | 54776.2 |
| fe-s cluster assembly scaffold sufa | D4M06_RS07255 | Not Available | Negative | 1576575 - 1576943 | 13286.8 |
| hypothetical protein | D4M06_RS07260 | Not Available | Negative | 1577492 - 1577680 | 7266.74 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | D4M06_RS07265 | Not Available | Negative | 1577780 - 1578190 | 14848.1 |
| fad-binding oxidoreductase | D4M06_RS07270 | Not Available | Negative | 1578187 - 1581243 | 113300.0 |
| ai-2e family transporter ydik | D4M06_RS07275 | Not Available | Positive | 1581632 - 1582744 | 39856.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




