Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-nad(p)-binding protein | D4M06_RS07175 | Not Available | Positive | 1559689 - 1561293 | 60797.6 |
| hypothetical protein | D4M06_RS07180 | Not Available | Negative | 1561305 - 1562117 | 29343.4 |
| thiosulfate reductase cytochrome b subunit | D4M06_RS07185 | Not Available | Negative | 1562121 - 1562906 | 29492.4 |
| 4fe-4s dicluster domain-containing protein | D4M06_RS07190 | Not Available | Negative | 1562903 - 1563571 | 25052.8 |
| ydhw family putative oxidoreductase system protein | D4M06_RS07195 | Not Available | Negative | 1563635 - 1564273 | 24152.5 |
| aldehyde ferredoxin oxidoreductase | D4M06_RS07200 | Not Available | Negative | 1564286 - 1566388 | 77857.8 |
| fumarate hydratase fumd | D4M06_RS07210 | Not Available | Negative | 1567490 - 1567699 | 7907.85 |
| pyruvate kinase i | D4M06_RS07215 | Not Available | Positive | 1568256 - 1569668 | 50732.5 |
| major outer membrane lipoprotein | D4M06_RS07220 | Not Available | Positive | 1569979 - 1570215 | 8323.95 |
| l,d-transpeptidase ldte | D4M06_RS07225 | Not Available | Negative | 1570278 - 1571282 | 36070.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




