Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | D4M06_RS07020 | Not Available | Negative | 1529926 - 1530582 | 25562.6 |
| c-type lysozyme inhibitor | D4M06_RS07025 | Not Available | Negative | 1530641 - 1530970 | 12568.2 |
| anhydro-n-acetylmuramic acid kinase | D4M06_RS07030 | Not Available | Negative | 1531068 - 1532177 | 39530.7 |
| outer membrane lipoprotein slyb | D4M06_RS07035 | Not Available | Positive | 1532450 - 1532917 | 15602.7 |
| transcriptional regulator slya | D4M06_RS07040 | Not Available | Negative | 1532964 - 1533398 | 16354.0 |
| duf1656 domain-containing protein | D4M06_RS07045 | Not Available | Positive | 1533599 - 1533835 | 8891.33 |
| hlyd family secretion protein | D4M06_RS07050 | Not Available | Positive | 1533838 - 1534695 | 31527.6 |
| fusc family protein | D4M06_RS07055 | Not Available | Positive | 1534695 - 1536707 | 75312.0 |
| superoxide dismutase | D4M06_RS07060 | Not Available | Negative | 1536708 - 1537229 | 17682.0 |
| aldo/keto reductase family oxidoreductase | D4M06_RS07065 | Not Available | Negative | 1537418 - 1538206 | 29519.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




