Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flic/fljb family flagellin | D4M06_RS06920 | Not Available | Negative | 1511248 - 1513005 | 59956.8 |
| flagellar filament capping protein flid | D4M06_RS06925 | Not Available | Positive | 1513271 - 1514668 | 48155.7 |
| flagellar export chaperone flis | D4M06_RS06930 | Not Available | Positive | 1514693 - 1515103 | 15050.1 |
| flagella biosynthesis regulatory protein flit | D4M06_RS06935 | Not Available | Positive | 1515103 - 1515468 | 13829.6 |
| alpha-amylase | D4M06_RS06940 | Not Available | Positive | 1515546 - 1517033 | 56615.3 |
| lipoprotein | D4M06_RS06945 | Not Available | Negative | 1517067 - 1517480 | 15002.1 |
| selenium metabolism membrane protein yede/fdht | D4M06_RS06950 | Not Available | Positive | 1517667 - 1518872 | 44415.5 |
| sulfurtransferase-like selenium metabolism protein yedf | D4M06_RS06955 | Not Available | Positive | 1518869 - 1519102 | 8639.5 |
| duf159 family protein | D4M06_RS06960 | Not Available | Positive | 1519211 - 1519879 | 24982.5 |
| gnat family n-acetyltransferase | D4M06_RS06965 | Not Available | Positive | 1519990 - 1520469 | 17918.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




