Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar transcriptional regulator flhd | D4M06_RS06770 | Not Available | Negative | 1487763 - 1488113 | 13302.3 |
| universal stress protein uspc | D4M06_RS06775 | Not Available | Positive | 1488893 - 1489321 | 15669.9 |
| alpha,alpha-trehalose-phosphate synthase | D4M06_RS06780 | Not Available | Negative | 1489328 - 1490752 | 53642.1 |
| trehalose-phosphatase | D4M06_RS06785 | Not Available | Negative | 1490727 - 1491527 | 29203.0 |
| l-arabinose abc transporter permease arah | D4M06_RS06790 | Not Available | Negative | 1491694 - 1492683 | 34330.2 |
| l-arabinose abc transporter atp-binding protein arag | D4M06_RS06795 | Not Available | Negative | 1492695 - 1494209 | 55021.6 |
| arabinose abc transporter substrate-binding protein | D4M06_RS06800 | Not Available | Negative | 1494279 - 1495268 | 35504.8 |
| non-heme ferritin-like protein | D4M06_RS06805 | Not Available | Positive | 1496065 - 1496568 | 18896.6 |
| duf2766 domain-containing protein | D4M06_RS06810 | Not Available | Negative | 1496648 - 1496899 | 9150.14 |
| stress response protein azuc | D4M06_RS06815 | Not Available | Negative | 1497014 - 1497100 | 3408.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




