Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | D4M06_RS06670 | Not Available | Negative | 1464496 - 1466925 | 89011.0 |
| cytochrome c-type protein tory | D4M06_RS06675 | Not Available | Negative | 1466950 - 1468050 | 40259.6 |
| copper homeostasis protein cutc | D4M06_RS06680 | Not Available | Negative | 1468438 - 1469184 | 26632.2 |
| voc family protein | D4M06_RS06685 | Not Available | Negative | 1469198 - 1469764 | 21293.2 |
| arginine--trna ligase | D4M06_RS06690 | Not Available | Positive | 1469980 - 1471713 | 64667.6 |
| lysozyme inhibitor lpri family protein | D4M06_RS06695 | Not Available | Positive | 1471890 - 1472378 | 18855.2 |
| flagellar protein flhe | D4M06_RS06700 | Not Available | Negative | 1472498 - 1472890 | 14064.2 |
| flagellar biosynthesis protein flha | D4M06_RS06705 | Not Available | Negative | 1472890 - 1474968 | 74833.6 |
| flagellar type iii secretion system protein flhb | D4M06_RS06710 | Not Available | Negative | 1474961 - 1476109 | 42291.5 |
| protein phosphatase chez | D4M06_RS06715 | Not Available | Negative | 1476311 - 1476955 | 23977.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




