Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebb family permuted papain-like enzyme | D4M06_RS06620 | Not Available | Positive | 1456169 - 1456771 | 22692.2 |
| crossover junction endodeoxyribonuclease ruvc | D4M06_RS06625 | Not Available | Negative | 1456773 - 1457294 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | D4M06_RS06630 | Not Available | Negative | 1457329 - 1458069 | 26438.1 |
| dihydroneopterin triphosphate diphosphatase | D4M06_RS06635 | Not Available | Negative | 1458098 - 1458550 | 17306.7 |
| aspartate--trna ligase | D4M06_RS06640 | Not Available | Negative | 1458668 - 1460440 | 65818.1 |
| hydrolase | D4M06_RS06645 | Not Available | Positive | 1460750 - 1461316 | 20453.3 |
| duf72 domain-containing protein | D4M06_RS06650 | Not Available | Positive | 1461313 - 1462131 | 31452.7 |
| hypothetical protein | D4M06_RS06655 | Not Available | Positive | 1462184 - 1462579 | 15227.2 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | D4M06_RS06660 | Not Available | Positive | 1462620 - 1463363 | 27792.3 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | D4M06_RS06665 | Not Available | Positive | 1463360 - 1464331 | 37054.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




