Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yobf family protein | D4M06_RS06420 | Not Available | Negative | 1417266 - 1417409 | 5212.44 |
| hypothetical protein | D4M06_RS06425 | Not Available | Negative | 1418078 - 1418365 | 10807.1 |
| phop/phoq regulator mgrb | D4M06_RS06430 | Not Available | Negative | 1418440 - 1418583 | 5552.09 |
| hypothetical protein | D4M06_RS06435 | Not Available | Positive | 1418743 - 1418982 | 8586.73 |
| dna-binding transcriptional regulator kdgr | D4M06_RS06440 | Not Available | Negative | 1419126 - 1419917 | 30031.1 |
| mfs transporter | D4M06_RS06445 | Not Available | Positive | 1420094 - 1421467 | 48101.7 |
| protease htpx | D4M06_RS06450 | Not Available | Negative | 1421513 - 1422394 | 31959.3 |
| carboxy terminal-processing peptidase | D4M06_RS06455 | Not Available | Negative | 1422586 - 1424634 | 76637.3 |
| rna chaperone proq | D4M06_RS06460 | Not Available | Negative | 1424654 - 1425352 | 25835.9 |
| gaf domain-containing protein | D4M06_RS06465 | Not Available | Negative | 1425449 - 1425946 | 18080.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




