Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | D4M06_RS06320 | Not Available | Negative | 1396681 - 1397796 | 42214.0 |
| long-chain-fatty-acid--coa ligase fadd | D4M06_RS06325 | Not Available | Negative | 1397878 - 1399563 | 62367.7 |
| slp family lipoprotein yeay | D4M06_RS06330 | Not Available | Negative | 1399768 - 1400349 | 20868.3 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | D4M06_RS06335 | Not Available | Negative | 1400389 - 1401084 | 25198.3 |
| atp-dependent dna helicase | D4M06_RS06340 | Not Available | Negative | 1401142 - 1403052 | 70365.9 |
| rida family protein | D4M06_RS06345 | Not Available | Positive | 1403184 - 1403528 | 12493.9 |
| duf1889 family protein | D4M06_RS06350 | Not Available | Positive | 1403890 - 1404249 | 13232.0 |
| yoah family protein | D4M06_RS06355 | Not Available | Negative | 1404369 - 1404548 | 6554.7 |
| aminodeoxychorismate synthase component 1 | D4M06_RS06360 | Not Available | Positive | 1404622 - 1405983 | 50938.3 |
| coa pyrophosphatase | D4M06_RS06365 | Not Available | Positive | 1405987 - 1406565 | 21464.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




