Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | D4M06_RS06215 | Not Available | Positive | 1379978 - 1381453 | 56071.7 |
| ggdef domain-containing protein | D4M06_RS06220 | Not Available | Positive | 1381634 - 1383124 | 56556.8 |
| mischarged aminoacyl-trna deacylase | D4M06_RS06225 | Not Available | Positive | 1383167 - 1383670 | 17851.7 |
| hypothetical protein | D4M06_RS06230 | Not Available | Negative | 1383671 - 1383775 | 3771.77 |
| duf441 domain-containing protein | D4M06_RS06235 | Not Available | Positive | 1383945 - 1384391 | 15286.7 |
| helix-turn-helix transcriptional regulator | D4M06_RS06240 | Not Available | Negative | 1384348 - 1385169 | 30588.3 |
| 2-nitroimidazole transporter | D4M06_RS06245 | Not Available | Positive | 1385266 - 1386447 | 41211.8 |
| duf488 domain-containing protein | D4M06_RS06250 | Not Available | Positive | 1386502 - 1386849 | 13356.9 |
| duf333 domain-containing lipoprotein yoaf | D4M06_RS06255 | Not Available | Negative | 1386871 - 1387125 | 8899.84 |
| yoak family small membrane protein | D4M06_RS06265 | Not Available | Positive | 1388366 - 1388464 | 3458.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




