Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoskeleton protein rodz | D4M06_RS05810 | Not Available | Positive | 1291194 - 1292207 | 36202.6 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | D4M06_RS05815 | Not Available | Positive | 1292234 - 1293352 | 40686.1 |
| histidine--trna ligase | D4M06_RS05820 | Not Available | Positive | 1293463 - 1294737 | 47032.2 |
| yfgm family protein | D4M06_RS05825 | Not Available | Positive | 1294755 - 1295375 | 22191.3 |
| outer membrane protein assembly factor bamb | D4M06_RS05830 | Not Available | Positive | 1295386 - 1296564 | 41831.5 |
| ribosome biogenesis gtpase der | D4M06_RS05835 | Not Available | Positive | 1296682 - 1298154 | 55039.1 |
| hypothetical protein | D4M06_RS05840 | Not Available | Positive | 1298223 - 1298438 | 7893.65 |
| exodeoxyribonuclease vii large subunit | D4M06_RS05845 | Not Available | Negative | 1298435 - 1299805 | 51737.3 |
| imp dehydrogenase | D4M06_RS05850 | Not Available | Positive | 1299967 - 1301433 | 52025.6 |
| glutamine-hydrolyzing gmp synthase | D4M06_RS05855 | Not Available | Positive | 1301502 - 1303079 | 58668.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




