Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | D4M06_RS05710 | Not Available | Positive | 1266355 - 1267092 | 26920.4 |
| fe-s cluster assembly transcriptional regulator iscr | D4M06_RS05715 | Not Available | Positive | 1267393 - 1267881 | 17337.6 |
| cysteine desulfurase | D4M06_RS05720 | Not Available | Positive | 1267993 - 1269207 | 45092.2 |
| fe-s cluster assembly scaffold iscu | D4M06_RS05725 | Not Available | Positive | 1269235 - 1269621 | 13849.3 |
| iron-sulfur cluster assembly protein isca | D4M06_RS05730 | Not Available | Positive | 1269638 - 1269961 | 11556.7 |
| co-chaperone hscb | D4M06_RS05735 | Not Available | Positive | 1270057 - 1270572 | 20138.8 |
| fe-s protein assembly chaperone hsca | D4M06_RS05740 | Not Available | Positive | 1270589 - 1272439 | 65656.3 |
| isc system 2fe-2s type ferredoxin | D4M06_RS05745 | Not Available | Positive | 1272441 - 1272776 | 12331.5 |
| fe-s cluster assembly protein iscx | D4M06_RS05750 | Not Available | Positive | 1272788 - 1272988 | 7731.92 |
| aminopeptidase pepb | D4M06_RS05755 | Not Available | Positive | 1273166 - 1274449 | 46258.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




