Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylpropionate dioxygenase ferredoxin reductase subunit | D4M06_RS05660 | Not Available | Negative | 1256429 - 1257631 | 43908.5 |
| 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | D4M06_RS05665 | Not Available | Negative | 1257641 - 1258453 | 28441.2 |
| bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | D4M06_RS05670 | Not Available | Negative | 1258450 - 1258770 | 11329.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | D4M06_RS05675 | Not Available | Negative | 1258770 - 1259288 | 20527.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha | D4M06_RS05680 | Not Available | Negative | 1259285 - 1260646 | 51111.8 |
| dna-binding transcriptional regulator hcar | D4M06_RS05685 | Not Available | Positive | 1260782 - 1261672 | 32812.2 |
| 3-phenylpropionate mfs transporter | D4M06_RS05690 | Not Available | Positive | 1261832 - 1262971 | 41623.2 |
| stationary phase inducible protein csie | D4M06_RS05695 | Not Available | Negative | 1262963 - 1264243 | 49043.4 |
| alpha/beta hydrolase | D4M06_RS05700 | Not Available | Negative | 1264434 - 1265288 | 31444.6 |
| inositol-1-monophosphatase | D4M06_RS05705 | Not Available | Negative | 1265433 - 1266236 | 29173.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




