Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative protein ulx | D4M06_RS15105 | Not Available | Negative | 3253206 - 3253646 | 17038.2 |
| Putative dna adenine methyltransferase and helicase, darb | D4M06_RS15110 | Not Available | Negative | 3253680 - 3260447 | 251423.0 |
| Putative portal protein | D4M06_RS15115 | Not Available | Positive | 3260524 - 3262233 | 62767.5 |
| Putative head processing protein pro | D4M06_RS15120 | Not Available | Positive | 3262226 - 3263245 | 36886.0 |
| Attl | Not Available | Not Available | Positive | 3522770 - 3522783 | Not Available |
| Putative prophage integrase | D4M06_RS16465 | Not Available | Positive | 3522953 - 3524122 | 44994.8 |
| Helicase | D4M06_RS16470 | Not Available | Positive | 3524142 - 3526001 | 70832.6 |
| hypothetical protein | D4M06_RS16475 | Not Available | Positive | 3525998 - 3526423 | 16606.1 |
| Amber mutation-suppressing protein | D4M06_RS16480 | Not Available | Negative | 3526751 - 3527323 | 21367.2 |
| Transactivation protein | D4M06_RS16485 | Not Available | Negative | 3527397 - 3527897 | 18972.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




