Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulatory protein p-ii | D4M06_RS05605 | Not Available | Positive | 1242405 - 1242743 | 12426.2 |
| no-inducible flavohemoprotein | D4M06_RS05610 | Not Available | Negative | 1242788 - 1243978 | 43870.0 |
| serine hydroxymethyltransferase | D4M06_RS05615 | Not Available | Positive | 1244306 - 1245559 | 45347.2 |
| rok family protein | D4M06_RS05620 | Not Available | Negative | 1245622 - 1246815 | 44622.4 |
| duf5107 domain-containing protein | D4M06_RS05625 | Not Available | Positive | 1246933 - 1250214 | 123772.0 |
| sugar abc transporter substrate-binding protein | D4M06_RS05630 | Not Available | Positive | 1250311 - 1251294 | 35073.2 |
| sugar abc transporter atp-binding protein | D4M06_RS05635 | Not Available | Positive | 1251317 - 1252828 | 55037.9 |
| abc transporter permease | D4M06_RS05640 | Not Available | Positive | 1252853 - 1253851 | 34498.6 |
| aldose 1-epimerase | D4M06_RS05650 | Not Available | Positive | 1254990 - 1255862 | 32658.1 |
| doxx family protein | D4M06_RS05655 | Not Available | Negative | 1255910 - 1256332 | 15198.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




