Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin shob | D4M06_RS05555 | Not Available | Positive | 1229599 - 1229679 | 3103.22 |
| 4fe-4s dicluster ferredoxin yfhl | D4M06_RS05560 | Not Available | Negative | 1229873 - 1230133 | 9848.85 |
| murr/rpir family transcriptional regulator | D4M06_RS05565 | Not Available | Negative | 1230189 - 1231037 | 30709.3 |
| phosphatidylglycerophosphatase c | D4M06_RS05570 | Not Available | Positive | 1231246 - 1231881 | 24410.8 |
| trna adenosine(34) deaminase tada | D4M06_RS05575 | Not Available | Positive | 1231906 - 1232442 | 20045.4 |
| membrane-bound lytic murein transglycosylase mltf | D4M06_RS05580 | Not Available | Negative | 1232439 - 1233995 | 58320.2 |
| phosphoribosylformylglycinamidine synthase | D4M06_RS05585 | Not Available | Positive | 1234252 - 1238139 | 141409.0 |
| two component system sensor histidine kinase qsee/glrk | D4M06_RS05590 | Not Available | Positive | 1238715 - 1240142 | 53296.5 |
| two-component system qseef-associated lipoprotein qseg | D4M06_RS05595 | Not Available | Positive | 1240307 - 1241020 | 27349.4 |
| two-component system response regulator glrr | D4M06_RS05600 | Not Available | Positive | 1241010 - 1242344 | 49151.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




