Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma-e factor rsea | D4M06_RS05505 | Not Available | Positive | 1220402 - 1221040 | 23839.2 |
| sigma-e factor regulatory protein rseb | D4M06_RS05510 | Not Available | Positive | 1221040 - 1221996 | 35751.8 |
| soxr-reducing system protein rsec | D4M06_RS05515 | Not Available | Positive | 1221993 - 1222472 | 16626.3 |
| elongation factor 4 | D4M06_RS05520 | Not Available | Positive | 1222670 - 1224469 | 66574.1 |
| signal peptidase i | D4M06_RS05525 | Not Available | Positive | 1224485 - 1225459 | 35948.3 |
| ribonuclease iii | D4M06_RS05530 | Not Available | Positive | 1225732 - 1226412 | 25551.6 |
| gtpase era | D4M06_RS05535 | Not Available | Positive | 1226409 - 1227314 | 33768.1 |
| dna repair protein reco | D4M06_RS05540 | Not Available | Positive | 1227326 - 1228054 | 27392.2 |
| pyridoxine 5'-phosphate synthase | D4M06_RS05545 | Not Available | Positive | 1228066 - 1228797 | 26385.9 |
| holo-acp synthase | D4M06_RS05550 | Not Available | Positive | 1228797 - 1229177 | 14125.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




