Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formaldehyde-responsive transcriptional repressor frmr | D4M06_RS05305 | Not Available | Positive | 1177456 - 1177731 | 10318.3 |
| s-(hydroxymethyl)glutathione dehydrogenase | D4M06_RS05310 | Not Available | Positive | 1177766 - 1178875 | 39335.2 |
| s-formylglutathione hydrolase frmb | D4M06_RS05315 | Not Available | Positive | 1178968 - 1179801 | 31249.9 |
| duf2058 domain-containing protein | D4M06_RS05320 | Not Available | Negative | 1179926 - 1180465 | 19923.8 |
| 3-(3-hydroxy-phenyl)propionate transporter mhpt | D4M06_RS05325 | Not Available | Negative | 1180567 - 1181778 | 41581.5 |
| 4-hydroxy-2-oxovalerate aldolase | D4M06_RS05330 | Not Available | Negative | 1181954 - 1182967 | 36440.6 |
| acetaldehyde dehydrogenase (acetylating) | D4M06_RS05335 | Not Available | Negative | 1182964 - 1183914 | 33588.6 |
| 2-keto-4-pentenoate hydratase | D4M06_RS05340 | Not Available | Negative | 1183911 - 1184720 | 28857.5 |
| 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase | D4M06_RS05345 | Not Available | Negative | 1184730 - 1185596 | 31913.2 |
| 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase | D4M06_RS05350 | Not Available | Negative | 1185614 - 1186558 | 34198.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




