Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine dioxygenase | D4M06_RS05255 | Not Available | Negative | 1165787 - 1166638 | 32381.2 |
| taurine abc transporter permease tauc | D4M06_RS05260 | Not Available | Negative | 1166635 - 1167462 | 29597.6 |
| taurine abc transporter atp-binding subunit | D4M06_RS05265 | Not Available | Negative | 1167459 - 1168226 | 28336.6 |
| taurine abc transporter substrate-binding protein | D4M06_RS05270 | Not Available | Negative | 1168239 - 1169201 | 34283.9 |
| response regulator transcription factor | D4M06_RS05275 | Not Available | Positive | 1169504 - 1170133 | 22827.7 |
| sensor histidine kinase | D4M06_RS05280 | Not Available | Positive | 1170133 - 1171674 | 57991.9 |
| mfs transporter | D4M06_RS05285 | Not Available | Positive | 1171747 - 1173063 | 48386.1 |
| abc transporter substrate-binding protein | D4M06_RS05290 | Not Available | Positive | 1173060 - 1174091 | 37404.5 |
| iron abc transporter permease | D4M06_RS05295 | Not Available | Positive | 1174160 - 1176238 | 75776.2 |
| fe(3+) ions import atp-binding protein fbpc | D4M06_RS05300 | Not Available | Positive | 1176250 - 1177296 | 39130.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




