Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS05205 | Not Available | Negative | 1154453 - 1154656 | 8034.13 |
| d-alanine--d-alanine ligase a | D4M06_RS05210 | Not Available | Positive | 1154734 - 1155828 | 39318.0 |
| duf2754 domain-containing protein | D4M06_RS05215 | Not Available | Negative | 1155852 - 1156064 | 8097.92 |
| duf2755 family protein | D4M06_RS05220 | Not Available | Positive | 1156324 - 1156632 | 11425.2 |
| surface-exposed outer membrane lipoprotein yaiw | D4M06_RS05225 | Not Available | Negative | 1156691 - 1157785 | 40419.5 |
| peptide antibiotic transporter sbma | D4M06_RS05230 | Not Available | Negative | 1157798 - 1159018 | 46461.9 |
| oxa-12 family class d beta-lactamase amph | D4M06_RS05235 | Not Available | Positive | 1159370 - 1160527 | 41851.5 |
| hydrogen peroxide resistance inhibitor ipra | D4M06_RS05240 | Not Available | Negative | 1160528 - 1161151 | 23957.1 |
| autotransporter adhesin ehab | D4M06_RS05245 | Not Available | Negative | 1161239 - 1164181 | 105212.0 |
| porphobilinogen synthase | D4M06_RS05250 | Not Available | Positive | 1164706 - 1165680 | 35626.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




