Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system pard family antitoxin | D4M06_RS05055 | Not Available | Negative | 1120937 - 1121179 | 8997.73 |
| protein translocase subunit secf | D4M06_RS05060 | Not Available | Negative | 1121331 - 1122302 | 35384.6 |
| protein translocase subunit secd | D4M06_RS05065 | Not Available | Negative | 1122313 - 1124160 | 66636.3 |
| preprotein translocase subunit yajc | D4M06_RS05070 | Not Available | Negative | 1124188 - 1124520 | 11887.9 |
| trna guanosine(34) transglycosylase tgt | D4M06_RS05075 | Not Available | Negative | 1124543 - 1125670 | 42596.1 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | D4M06_RS05080 | Not Available | Negative | 1125725 - 1126795 | 39433.0 |
| acp phosphodiesterase | D4M06_RS05085 | Not Available | Positive | 1126888 - 1127469 | 22918.3 |
| hypothetical protein | D4M06_RS05090 | Not Available | Negative | 1127490 - 1128935 | 55230.3 |
| maltodextrin glucosidase | D4M06_RS05095 | Not Available | Negative | 1129123 - 1130940 | 69288.1 |
| proline-specific permease proy | D4M06_RS05100 | Not Available | Negative | 1131096 - 1132469 | 50218.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




