Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase proteolytic subunit clpp | D4M06_RS04905 | Not Available | Negative | 1092083 - 1092706 | 23188.1 |
| trigger factor | D4M06_RS04910 | Not Available | Negative | 1092951 - 1094249 | 48195.4 |
| transcriptional regulator bola | D4M06_RS04915 | Not Available | Negative | 1094593 - 1094910 | 11994.3 |
| lipoprotein | D4M06_RS04920 | Not Available | Positive | 1095215 - 1095793 | 20979.3 |
| muropeptide mfs transporter ampg | D4M06_RS04925 | Not Available | Positive | 1095837 - 1097312 | 53248.3 |
| cytochrome o ubiquinol oxidase subunit ii | D4M06_RS04930 | Not Available | Positive | 1097772 - 1098719 | 34932.2 |
| cytochrome o ubiquinol oxidase subunit i | D4M06_RS04935 | Not Available | Positive | 1098741 - 1100732 | 74372.2 |
| cytochrome o ubiquinol oxidase subunit iii | D4M06_RS04940 | Not Available | Positive | 1100722 - 1101336 | 22652.0 |
| cytochrome o ubiquinol oxidase subunit iv | D4M06_RS04945 | Not Available | Positive | 1101336 - 1101665 | 12030.2 |
| protoheme ix farnesyltransferase | D4M06_RS04950 | Not Available | Positive | 1101677 - 1102567 | 32250.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




