Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | D4M06_RS04855 | Not Available | Negative | 1080531 - 1080989 | 17438.4 |
| hmp-pp phosphatase | D4M06_RS04860 | Not Available | Negative | 1081141 - 1081959 | 30304.6 |
| sgrr family transcriptional regulator | D4M06_RS04865 | Not Available | Positive | 1082059 - 1083759 | 64936.2 |
| 7-cyano-7-deazaguanine synthase quec | D4M06_RS04870 | Not Available | Positive | 1083824 - 1084519 | 25481.6 |
| ybgc/fadm family acyl-coa thioesterase | D4M06_RS04875 | Not Available | Negative | 1084571 - 1084969 | 15098.2 |
| hypothetical protein | D4M06_RS04880 | Not Available | Negative | 1085075 - 1085446 | 12717.4 |
| peptidylprolyl isomerase | D4M06_RS04885 | Not Available | Negative | 1085597 - 1087468 | 68153.7 |
| dna-binding protein hu-beta | D4M06_RS04890 | Not Available | Negative | 1087660 - 1087932 | 9226.08 |
| endopeptidase la | D4M06_RS04895 | Not Available | Negative | 1088141 - 1090495 | 87442.4 |
| atp-dependent protease atp-binding subunit clpx | D4M06_RS04900 | Not Available | Negative | 1090683 - 1091957 | 46358.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




