Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS04800 | Not Available | Positive | 1070119 - 1070589 | 18268.2 |
| cyclic-guanylate-specific phosphodiesterase pdeb | D4M06_RS04805 | Not Available | Positive | 1070753 - 1072303 | 58833.8 |
| duf1428 domain-containing protein | D4M06_RS04810 | Not Available | Negative | 1072345 - 1072698 | 13318.9 |
| mgmt family protein | D4M06_RS04820 | Not Available | Positive | 1073077 - 1073388 | 11488.8 |
| hypothetical protein | D4M06_RS04825 | Not Available | Negative | 1073421 - 1073993 | 19442.3 |
| acyl-coa thioesterase ii | D4M06_RS04830 | Not Available | Positive | 1074211 - 1075071 | 31968.1 |
| ammonium transporter amtb | D4M06_RS04835 | Not Available | Negative | 1075120 - 1076406 | 44517.4 |
| p-ii family nitrogen regulator | D4M06_RS04840 | Not Available | Negative | 1076436 - 1076774 | 12259.9 |
| smdb family multidrug efflux abc transporter permease/atp-binding protein | D4M06_RS04845 | Not Available | Negative | 1076955 - 1078736 | 65226.5 |
| smda family multidrug abc transporter permease/atp-binding protein | D4M06_RS04850 | Not Available | Negative | 1078729 - 1080501 | 66005.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




