Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf454 family protein | D4M06_RS04750 | Not Available | Negative | 1058281 - 1058658 | 14771.0 |
| primosomal replication protein n'' | D4M06_RS04755 | Not Available | Positive | 1058728 - 1059255 | 20388.6 |
| pleiotropic regulatory protein rsms | D4M06_RS04760 | Not Available | Positive | 1059269 - 1059433 | 6111.26 |
| lymphostatin efa1/lifa | D4M06_RS04765 | Not Available | Negative | 1059472 - 1062834 | 127226.0 |
| multidrug efflux transporter transcriptional repressor acrr | D4M06_RS04770 | Not Available | Negative | 1062962 - 1063609 | 24798.1 |
| multidrug efflux rnd transporter periplasmic adaptor subunit acra | D4M06_RS04775 | Not Available | Positive | 1063751 - 1064944 | 42199.1 |
| multidrug efflux rnd transporter permease subunit | D4M06_RS04780 | Not Available | Positive | 1064967 - 1068116 | 113622.0 |
| hha toxicity modulator tomb | D4M06_RS04785 | Not Available | Positive | 1068662 - 1069036 | 14558.1 |
| hemolysin expression modulator hha | D4M06_RS04790 | Not Available | Positive | 1069062 - 1069280 | 8628.46 |
| maltose o-acetyltransferase | D4M06_RS04795 | Not Available | Positive | 1069452 - 1070003 | 20113.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




