Escherichia coli strain 593596 SAMN10057753-rid9463433.guided.151

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 593596 SAMN10057753-rid9463433.guided.151 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain thrives optimally at a temperature of 37.0°C, which aligns with the physiological conditions of its host-associated habitat. E. coli is classified as a facultative anaerobe, indicating its ability to grow in both aerobic and anaerobic environments, a trait that enhances its adaptability within various biological contexts. The host-associated habitat of this strain suggests a potential role in the microbial communities of the gastrointestinal tract, where it may contribute to nutrient absorption and metabolic processes. The preference for a temperature close to that of warm-blooded hosts further supports its adaptation to life within a host organism. E. coli strains are known for their metabolic versatility, which allows them to utilize a range of substrates and survive in diverse environmental conditions. This strain's combination of morphological and physiological traits may facilitate its interaction with other microbial species in the gut microbiome, contributing to complex ecological dynamics that influence host health. Understanding the specific traits of strain 593596 could provide insights into its functional roles in host-associated environments, particularly concerning nutrient cycling and microbial community interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 593596 SAMN10057753-rid9463433.guided.151
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain 593596 SAMN10057753-rid9463433.guided.151

Accession NumberRTVT00000000.2

Gene Summary

Adenine Count

1370210 bp

Thymine Count

1359659 bp

Guanine Count

1361880 bp

Cytosine Count

1378938 bp

Genome Length

5488722 bp

Protein-coding Genes

4966 genes

Non-Coding Genes

365 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinD4M06_RS15010Not Available-3239819 - 324040322770.9
Putative dna repair proteinD4M06_RS15015Not Available+3240578 - 324096714282.8
Prevention of host death by doc toxicityD4M06_RS15020Not Available+3241040 - 32412618133.53
Toxin proteinD4M06_RS15025Not Available+3241261 - 324164113545.1
PdcaD4M06_RS15030Not Available+3241646 - 32418256748.57
Hypothetical proteinD4M06_RS15035Not Available+3241853 - 324289639807.9
Late promoter-activating protein lpaD4M06_RS15040Not Available+3242985 - 324343718146.8
Terminase a proteinD4M06_RS15045Not Available+3243524 - 324471745217.4
Putative large terminase proteinD4M06_RS15050Not Available+3244717 - 324620155548.7
Repressor protein c1D4M06_RS15055Not Available-3246226 - 324707732501.0

Displaying genes 121 – 130 of 5361 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites