Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructoselysine 3-epimerase | D4M06_RS04395 | Not Available | Negative | 966633 - 967460 | 31000.4 |
| fructoselysine 6-phosphate deglycase | D4M06_RS04400 | Not Available | Negative | 967511 - 968533 | 38548.4 |
| fructoselysine/psicoselysine transporter | D4M06_RS04405 | Not Available | Negative | 968554 - 969942 | 49313.4 |
| yhfl family protein | D4M06_RS04410 | Not Available | Negative | 970187 - 970354 | 5819.16 |
| uroporphyrinogen-iii c-methyltransferase | D4M06_RS04415 | Not Available | Negative | 970609 - 971982 | 49954.4 |
| nitrite transporter nirc | D4M06_RS04420 | Not Available | Negative | 972001 - 972807 | 28578.2 |
| nitrite reductase small subunit nird | D4M06_RS04425 | Not Available | Negative | 972933 - 973259 | 12284.7 |
| nitrite reductase large subunit | D4M06_RS04430 | Not Available | Negative | 973256 - 975799 | 93112.6 |
| mfs transporter tsga | D4M06_RS04435 | Not Available | Negative | 976061 - 977242 | 43110.9 |
| peptidylprolyl isomerase a | D4M06_RS04440 | Not Available | Positive | 977513 - 978085 | 20432.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




