Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna utilization protein hofp | D4M06_RS04340 | Not Available | Positive | 956501 - 956905 | 15115.1 |
| dna uptake porin hofq | D4M06_RS04345 | Not Available | Positive | 956817 - 958055 | 44746.9 |
| shikimate kinase arok | D4M06_RS04350 | Not Available | Positive | 958456 - 958977 | 19539.2 |
| 3-dehydroquinate synthase | D4M06_RS04355 | Not Available | Positive | 959034 - 960122 | 38886.3 |
| cell division protein damx | D4M06_RS04360 | Not Available | Positive | 960214 - 961500 | 46106.2 |
| adenine-specific dna-methyltransferase | D4M06_RS04365 | Not Available | Positive | 961607 - 962443 | 32101.2 |
| ribulose-phosphate 3-epimerase | D4M06_RS04370 | Not Available | Positive | 962461 - 963138 | 24555.7 |
| phosphoglycolate phosphatase | D4M06_RS04375 | Not Available | Positive | 963131 - 963889 | 27348.7 |
| tryptophan--trna ligase | D4M06_RS04380 | Not Available | Positive | 963882 - 964886 | 37425.9 |
| transcriptional regulator phob | D4M06_RS04385 | Not Available | Negative | 965017 - 965748 | 27836.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




