Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rtcb family protein | D4M06_RS04190 | Not Available | Positive | 918689 - 919915 | 45240.4 |
| rna 3'-terminal phosphate cyclase | D4M06_RS04195 | Not Available | Positive | 919919 - 920947 | 36334.1 |
| gnat family n-acetyltransferase | D4M06_RS04200 | Not Available | Negative | 920997 - 921482 | 17651.6 |
| duf1778 domain-containing protein | D4M06_RS04205 | Not Available | Negative | 921473 - 921751 | 10421.5 |
| hth-type transcriptional regulator malt | D4M06_RS04210 | Not Available | Negative | 921818 - 924523 | 103022.0 |
| maltodextrin phosphorylase | D4M06_RS04215 | Not Available | Positive | 925135 - 927528 | 90527.4 |
| 4-alpha-glucanotransferase | D4M06_RS04220 | Not Available | Positive | 927538 - 929622 | 78543.7 |
| gluconate transporter | D4M06_RS04225 | Not Available | Negative | 929667 - 930983 | 45969.6 |
| fe-s biogenesis protein nfua | D4M06_RS04230 | Not Available | Negative | 931344 - 931919 | 20998.9 |
| dna utilization protein gntx | D4M06_RS04235 | Not Available | Negative | 931978 - 932661 | 25799.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




