Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase autocleavage activator panm | D4M06_RS03990 | Not Available | Negative | 872864 - 873247 | 14559.4 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | D4M06_RS03995 | Not Available | Positive | 873671 - 874780 | 39362.9 |
| high-affinity branched-chain amino acid abc transporter permease livh | D4M06_RS04000 | Not Available | Positive | 874828 - 875754 | 32984.4 |
| high-affinity branched-chain amino acid abc transporter permease livm | D4M06_RS04005 | Not Available | Positive | 875751 - 877028 | 46320.2 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | D4M06_RS04010 | Not Available | Positive | 877025 - 877792 | 28428.7 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | D4M06_RS04015 | Not Available | Positive | 877794 - 878507 | 26297.9 |
| tetratricopeptide repeat protein | D4M06_RS04020 | Not Available | Positive | 878626 - 879372 | 28781.7 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | D4M06_RS04025 | Not Available | Positive | 879732 - 881048 | 48451.2 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | D4M06_RS04030 | Not Available | Positive | 881146 - 882033 | 33295.8 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | D4M06_RS04035 | Not Available | Positive | 882030 - 882875 | 31473.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




