Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2500 domain-containing protein | D4M06_RS03940 | Not Available | Positive | 864859 - 865218 | 13543.4 |
| duf1145 family protein | D4M06_RS03945 | Not Available | Negative | 865221 - 865490 | 10280.4 |
| 16s rrna (guanine(966)-n(2))-methyltransferase | D4M06_RS03950 | Not Available | Negative | 865480 - 866076 | 21708.9 |
| signal recognition particle-docking protein ftsy | D4M06_RS03955 | Not Available | Positive | 866226 - 867722 | 54733.5 |
| cell division atp-binding protein ftse | D4M06_RS03960 | Not Available | Positive | 867725 - 868393 | 24440.8 |
| cell division protein ftsx | D4M06_RS03965 | Not Available | Positive | 868386 - 869444 | 38545.9 |
| rna polymerase sigma factor rpoh | D4M06_RS03970 | Not Available | Positive | 869689 - 870543 | 32470.6 |
| branched-chain amino acid abc transporter substrate-binding protein | D4M06_RS03975 | Not Available | Positive | 870814 - 871917 | 39078.5 |
| duf1778 domain-containing protein | D4M06_RS03980 | Not Available | Positive | 872067 - 872333 | 9910.89 |
| gnat family n-acetyltransferase | D4M06_RS03985 | Not Available | Positive | 872340 - 872867 | 19693.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




