Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel import atp-binding protein nikd | D4M06_RS03790 | Not Available | Negative | 837335 - 838099 | 26792.1 |
| nickel abc transporter permease subunit nikc | D4M06_RS03795 | Not Available | Negative | 838099 - 838932 | 30363.8 |
| nickel abc transporter permease subunit nikb | D4M06_RS03800 | Not Available | Negative | 838929 - 839873 | 35294.4 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | D4M06_RS03805 | Not Available | Negative | 839873 - 841447 | 58728.2 |
| 4'-phosphopantetheinyl transferase acpt | D4M06_RS03810 | Not Available | Negative | 841558 - 842145 | 21738.9 |
| beta-ketoacyl-acp synthase | D4M06_RS03815 | Not Available | Negative | 842147 - 843376 | 44150.3 |
| 3-oxoacyl-acp reductase fabg | D4M06_RS03820 | Not Available | Negative | 843373 - 844104 | 25671.1 |
| 3-hydroxy-fatty acyl-acp dehydratase | D4M06_RS03825 | Not Available | Negative | 844104 - 844568 | 16621.8 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | D4M06_RS03830 | Not Available | Negative | 844565 - 845734 | 41123.2 |
| duf3261 domain-containing protein | D4M06_RS03835 | Not Available | Negative | 845736 - 846320 | 21412.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




