Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenite/antimonite:h(+) antiporter arsb | D4M06_RS03640 | Not Available | Negative | 805179 - 806468 | 45500.2 |
| as(iii)-sensing metalloregulatory transcriptional repressor arsr | D4M06_RS03645 | Not Available | Negative | 806522 - 806875 | 13340.4 |
| damage inducible protein | D4M06_RS03650 | Not Available | Positive | 807619 - 807702 | 3021.06 |
| glutathione-disulfide reductase | D4M06_RS03655 | Not Available | Negative | 807756 - 809108 | 48741.3 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | D4M06_RS03660 | Not Available | Negative | 809180 - 810022 | 31988.5 |
| oligopeptidase a | D4M06_RS03665 | Not Available | Positive | 810225 - 812267 | 77199.4 |
| 16s rrna (guanine(1516)-n(2))-methyltransferase rsmj | D4M06_RS03670 | Not Available | Positive | 812275 - 813027 | 26950.8 |
| dipeptide/tripeptide permease dtpb | D4M06_RS03675 | Not Available | Negative | 813076 - 814545 | 53580.4 |
| universal stress protein uspa | D4M06_RS03680 | Not Available | Negative | 814862 - 815296 | 16067.3 |
| universal stress protein uspb | D4M06_RS03685 | Not Available | Positive | 815687 - 816022 | 13028.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




