Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme utilization cystosolic carrier protein hutx | D4M06_RS03590 | Not Available | Negative | 794812 - 795306 | 18329.8 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | D4M06_RS03595 | Not Available | Negative | 795319 - 796656 | 49552.1 |
| hemin abc transporter substrate-binding protein | D4M06_RS03600 | Not Available | Negative | 796676 - 797590 | 32780.9 |
| hypothetical protein | D4M06_RS03605 | Not Available | Positive | 797791 - 797997 | 8107.93 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | D4M06_RS03610 | Not Available | Positive | 798273 - 800255 | 72505.0 |
| hematinate-forming heme oxygenase chus | D4M06_RS03615 | Not Available | Positive | 800304 - 801332 | 38702.9 |
| helix-turn-helix transcriptional regulator | D4M06_RS03620 | Not Available | Negative | 801393 - 801923 | 20452.5 |
| outer membrane lipoprotein slp | D4M06_RS03625 | Not Available | Negative | 802079 - 802645 | 20949.1 |
| hypothetical protein | D4M06_RS03630 | Not Available | Negative | 802999 - 804114 | 43125.0 |
| glutaredoxin-dependent arsenate reductase | D4M06_RS03635 | Not Available | Negative | 804741 - 805166 | 15872.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




