Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-n-hydroxylaminopurine resistance protein ycbx | D4M06_RS03390 | Not Available | Negative | 754614 - 755723 | 40639.6 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | D4M06_RS03395 | Not Available | Positive | 755967 - 758075 | 78900.6 |
| abc transporter atp-binding protein | D4M06_RS03400 | Not Available | Positive | 758087 - 759994 | 72137.2 |
| membrane integrity-associated transporter subunit pqia | D4M06_RS03405 | Not Available | Positive | 760124 - 761377 | 46436.2 |
| intermembrane transport protein pqib | D4M06_RS03410 | Not Available | Positive | 761382 - 763022 | 60483.0 |
| membrane integrity-associated transporter subunit pqic | D4M06_RS03415 | Not Available | Positive | 763019 - 763582 | 20605.5 |
| ribosome modulation factor | D4M06_RS03420 | Not Available | Positive | 763838 - 764005 | 6507.88 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | D4M06_RS03425 | Not Available | Negative | 764075 - 764593 | 18970.2 |
| lon protease family protein | D4M06_RS03430 | Not Available | Negative | 764662 - 766422 | 65808.3 |
| macrodomain ter protein matp | D4M06_RS03435 | Not Available | Positive | 766608 - 767060 | 17694.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




