Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | D4M06_RS03180 | Not Available | Negative | 703167 - 704927 | 65669.0 |
| duf421 domain-containing protein | D4M06_RS03185 | Not Available | Positive | 705057 - 705749 | 26273.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | D4M06_RS03190 | Not Available | Positive | 705948 - 707036 | 39856.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | D4M06_RS03195 | Not Available | Positive | 707107 - 708390 | 46098.5 |
| m48 family metallopeptidase | D4M06_RS03200 | Not Available | Positive | 708559 - 709323 | 26796.7 |
| (d)cmp kinase | D4M06_RS03205 | Not Available | Positive | 709496 - 710179 | 24747.8 |
| 30s ribosomal protein s1 | D4M06_RS03210 | Not Available | Positive | 710290 - 711963 | 61161.5 |
| integration host factor subunit beta | D4M06_RS03215 | Not Available | Positive | 712123 - 712407 | 10651.8 |
| comec family protein | D4M06_RS03220 | Not Available | Positive | 712614 - 714878 | 84448.9 |
| lipid a abc transporter atp-binding protein/permease msba | D4M06_RS03225 | Not Available | Positive | 714915 - 716663 | 64464.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




