Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine--trna ligase | D4M06_RS03125 | Not Available | Positive | 689192 - 690484 | 48416.8 |
| dimethylsulfoxide reductase subunit a | D4M06_RS03130 | Not Available | Positive | 690723 - 693167 | 90345.7 |
| dimethylsulfoxide reductase subunit b | D4M06_RS03135 | Not Available | Positive | 693178 - 693795 | 22900.2 |
| dimethyl sulfoxide reductase | D4M06_RS03140 | Not Available | Positive | 693797 - 694660 | 30862.2 |
| hydrolase | D4M06_RS03145 | Not Available | Negative | 694696 - 695322 | 23089.5 |
| mfs transporter | D4M06_RS03150 | Not Available | Positive | 695637 - 696785 | 41462.2 |
| amino acid permease | D4M06_RS03155 | Not Available | Positive | 696995 - 698425 | 52472.5 |
| pyruvate formate lyase 1-activating protein | D4M06_RS03165 | Not Available | Negative | 698635 - 699375 | 28205.9 |
| formate c-acetyltransferase | D4M06_RS03170 | Not Available | Negative | 699567 - 701849 | 85355.0 |
| formate transporter foca | D4M06_RS03175 | Not Available | Negative | 701904 - 702761 | 30992.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




