Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase autocleavage activator panm | E9D03_RS03880 | Not Available | Negative | 854381 - 854764 | 14559.4 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | E9D03_RS03885 | Not Available | Positive | 855188 - 856297 | 39362.9 |
| high-affinity branched-chain amino acid abc transporter permease livh | E9D03_RS03890 | Not Available | Positive | 856345 - 857271 | 32984.4 |
| high-affinity branched-chain amino acid abc transporter permease livm | E9D03_RS03895 | Not Available | Positive | 857268 - 858545 | 46320.2 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | E9D03_RS03900 | Not Available | Positive | 858542 - 859309 | 28428.7 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | E9D03_RS03905 | Not Available | Positive | 859311 - 860024 | 26297.9 |
| tetratricopeptide repeat protein | E9D03_RS03910 | Not Available | Positive | 860143 - 860889 | 28781.7 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | E9D03_RS03915 | Not Available | Positive | 861249 - 862565 | 48451.2 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | E9D03_RS03920 | Not Available | Positive | 862663 - 863550 | 33295.8 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | E9D03_RS03925 | Not Available | Positive | 863547 - 864392 | 31473.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




