Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hicb family antitoxin | E9D03_RS03630 | Not Available | Positive | 811425 - 811784 | 13403.0 |
| class ii aldolase | E9D03_RS03635 | Not Available | Negative | 811834 - 812694 | 31389.8 |
| hpr family phosphocarrier protein | E9D03_RS03640 | Not Available | Negative | 812726 - 812995 | 9806.71 |
| carbohydrate kinase | E9D03_RS03645 | Not Available | Negative | 812985 - 814493 | 55578.7 |
| pts galactitol transporter subunit iic | E9D03_RS03650 | Not Available | Negative | 814486 - 815844 | 48725.3 |
| pts sugar transporter subunit iib | E9D03_RS03655 | Not Available | Negative | 815921 - 816202 | 9813.99 |
| pts sugar transporter subunit iia | E9D03_RS03660 | Not Available | Negative | 816199 - 816672 | 17486.4 |
| gntr family transcriptional regulator | E9D03_RS03665 | Not Available | Negative | 816697 - 817443 | 28369.2 |
| nickel-responsive transcriptional regulator nikr | E9D03_RS03670 | Not Available | Negative | 817642 - 818043 | 15094.7 |
| nickel import atp-binding protein nike | E9D03_RS03675 | Not Available | Negative | 818049 - 818855 | 29727.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




