Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic phosphate transporter pita | E9D03_RS03580 | Not Available | Negative | 797610 - 799109 | 53392.4 |
| nad(p)/fad-dependent oxidoreductase | E9D03_RS03585 | Not Available | Positive | 799341 - 800543 | 43711.6 |
| hypothetical protein | E9D03_RS03590 | Not Available | Positive | 800679 - 800834 | 6095.62 |
| duf2776 domain-containing protein | E9D03_RS03595 | Not Available | Negative | 800861 - 801913 | 37659.3 |
| duf4049 domain-containing protein | E9D03_RS03600 | Not Available | Positive | 802297 - 803907 | 61810.0 |
| duf4049 domain-containing protein | E9D03_RS03605 | Not Available | Positive | 804169 - 805791 | 61226.8 |
| hlyd family secretion protein | E9D03_RS03610 | Not Available | Positive | 806157 - 807224 | 38788.5 |
| ribosome-associated atpase/putative transporter rbba | E9D03_RS03615 | Not Available | Positive | 807221 - 809956 | 100789.0 |
| abc-2 transporter permease | E9D03_RS03620 | Not Available | Positive | 809956 - 811080 | 41076.3 |
| type ii toxin-antitoxin system hica family toxin | E9D03_RS03625 | Not Available | Positive | 811153 - 811428 | 10166.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




