Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kinase inhibitor | E9D03_RS03370 | Not Available | Positive | 757090 - 757566 | 17072.0 |
| t3ss effector zinc metalloprotease nled | E9D03_RS03375 | Not Available | Negative | 758073 - 758771 | 25962.6 |
| type iii secretion system effector kinase nleh1-1 | E9D03_RS03385 | Not Available | Negative | 759002 - 759883 | 32392.1 |
| tail fiber assembly protein | E9D03_RS03390 | Not Available | Negative | 760053 - 760214 | 5858.94 |
| type iii secretion system effector zinc metalloprotease nlec | E9D03_RS03400 | Not Available | Negative | 760711 - 761730 | 38258.2 |
| type iii secretion system effector arginine glycosyltransferase nleb2 | E9D03_RS03405 | Not Available | Negative | 761764 - 762744 | 38058.2 |
| glutamate decarboxylase | E9D03_RS03410 | Not Available | Positive | 762853 - 763103 | 9439.32 |
| acid resistance transcriptional activator gadx | E9D03_RS03415 | Not Available | Positive | 763474 - 764298 | 31374.2 |
| acid resistance transcriptional activator gadw | E9D03_RS03420 | Not Available | Positive | 764666 - 765394 | 28030.0 |
| multidrug efflux rnd transporter permease subunit | E9D03_RS03425 | Not Available | Negative | 765757 - 768870 | 111568.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




